FAIRification of Genomic Tracks - BSC developmentsFAIRification of Genomic Tracks - BSC developmentsELIXIR Recommended Interoperability Resource. Since February 2021 FAIRTracks ecosystem is an ELIXIR recommended interoperability resource.
ELIXIR Implementation Study 2018-2019. The FAIRification of Genomic Tracks Implementation Study was focused on “FAIRifying” the metadata related to genomic annotation track files contained in track hubs. To achieve this, we have developed a common data model and technical solutions compatible with the existing TrackHub exchange format for genome browser tracks and implemented demonstrators to show the feasibility of this proposal across systems and programming languages.
The repository where all the works have been developed is at: https://github.com/fairtracks/fairtracks_standard
GitHub repositories
FAIRification of Genomic Data Tracks JSON Schema validator code is available in GitHub:
Original GitHub repository: https://github.com/fairtracks/fairtracks_validator
Python Library GitHub repository: https://github.com/fairtracks/fairtracks_validator_python
Using REST API from command line (screencast): https://asciinema.org/a/279246
Installing and using command line validator (screencast): https://asciinema.org/a/279252